Publications

Feng GAO, Junxiang Ding, Bao-Wen GAI, Du CAI, Chu-Ling HU, Feng-Ao Wang, Ruikun He, Junwei Liu, Yixue Li, Xiao-Jian Wu (2025). Interpretable Multimodal Fusion Model for Bridged Histology and Genomics Survival Prediction in Pan-Cancer. Advanced Science.

Junwei Liu, Xiaoping Cen, Chenxin Yi, Feng-Ao Wang, Junxiang Ding, Jinyu Cheng, Qinhua Wu, Bao-Wen GAI, Yiwen Zhou, Ruikun He, Feng GAO, Yixue Li (2025). Challenges in AI-driven Biomedical Multimodal Data Fusion and Analysis. Genomics Proteomics Bioinformatics.

Zhen Xie, Du CAI, Runyi Ye, Zhen Shan, Ying Lin, Feng GAO, Nan Shao, Xiaying Kuang (2024). Integrated immune-related gene signature predicts clinical outcome for patients with Luminal B breast cancer. Gland Surgery.

Feng Guo, Xianglin Ji, Chuxiao Xiong, Hailiang Sun, Zhenghua Liang, Richard Yan-Do, Bao-Wen GAI, Feng GAO, Linfeng Huang, Zhongping Li, Becki Yi Kuang, Peng Shi (2024). Single-cell encoded gene silencing for high-throughput combinatorial siRNA screening. Nature Communications.

Jia-Xin LEI, Run-Xian WANG, Chu-Ling HU, Xiaoying Lou, Min-Yi LV, Cheng-Hang LI, Bao-Wen GAI, Xiao-Jian Wu, Ruoxu Dou, Du CAI, Feng GAO (2024). Deciphering Tertiary Lymphoid Structure Heterogeneity Reveals Prognostic Signature and Therapeutic Potentials for Colorectal Cancer: A Multicenter Retrospective Cohort Study. International Journal of Surgery.

Shu-Ting YANG, Shuoming Luo, Zhiguang Zhou (2024). A new vision of diabetes classification： A shift from clinical manifestation to etiological molecular mechanism. Journal of Practical Medicine / Shiyong Yixue Zazhi.

Feng-Ao Wang, Zhenfeng Zhuang, Feng GAO, Ruikun He, Shaoting Zhang, Liansheng Wang, Junwei Liu, Yixue Li (2024). TMO-Net: an explainable pretrained multi-omics model for multi-task learning in oncology. Genome Biology.

Wei Lou, Xiang Wan, Guanbin Li, Xiaoying Lou, Cheng-Hang LI, Feng GAO, Haofeng Li (2024). Structure Embedded Nucleus Classification for Histopathology Images. IEEE Transactions on Medical Imaging.

Xinkai Zhao, Chaowei Fang, De-Jun FAN, Xutao Lin, Feng GAO, Guanbin Li (2024). Cross-Level Contrastive Learning and Consistency Constraint for Semi-Supervised Medical Image Segmentation. IEEE International Symposium on Biomedical Imaging.

Ngan Pan Bennett Au, Tan Wu, Xinyu Chen, Feng GAO, Yuen Tung Yolanda Li, Wing Yip Tam, Kwan Ngok Yu, Daniel H Geschwind, Giovanni Coppola, Xin Wang, Chi Him Eddie Ma (2023). Genome-wide study reveals novel roles for formin-2 in axon regeneration as a microtubule dynamics regulator and therapeutic target for nerve repair. Neuron.

Jia Ke, Cheng Jin, Jinghua Tang, Haimei Cao, Songbing He, Peirong Ding, Xiaofeng Jiang, Hengyu Zhao, Wuteng Cao, Xiaochun Meng, Feng GAO, Ping Lan, Ruijiang Li, Xiaojian Wu (2023). A Longitudinal MRI-Based Artificial Intelligence System to Predict Pathological Complete Response After Neoadjuvant Therapy in Rectal Cancer: A Multicenter Validation Study. Diseases of the Colon & Rectum.

Yanjiao Hua, Du CAI, Cole Andrea Shirley, Sien Mo, Ruyun Chen, Feng GAO, Fangying Chen (2023). A prognostic model for ovarian neoplasms established by an integrated analysis of 1580 transcriptomic profiles. Scientific Reports.

Wentai Hou, Yan He, Bingjian Yao, Lequan Yu, Rongshan Yu, Feng GAO, Liansheng Wang (2023). Multi-scope Analysis Driven Hierarchical Graph Transformer for Whole Slide Image Based Cancer Survival Prediction. Medical Image Computing and Computer Assisted Intervention.

Lin Qi, Jie-Ying Liang, Zhong-Wu Li, Shao-Yan Xi, Yu-Ni Lai, Feng GAO, Xian-Rui Zhang, De-Shen Wang, Ming-Tao Hu, Yi Cao, Li-Jian Xu, Ronald C K Chan, Bao-Cai Xing, Xin Wang, Yu-Hong Li (2023). Deep learning-derived spatial organization features on histology images predicts prognosis in colorectal liver metastasis patients after hepatectomy. iScience.

Shu-Ting YANG, Chao Deng, Bobo He, Xi Chen, Xia Li, Zhiguang Zhou (2023). Application of the Chinese Expert Consensus on Diabetes Classification in Clinical Practice. Zhonghua Nei Ke Za Zhi (Chinese Journal of Internal Medicine).

Yize Mao, Hui Xie, Min-Yi LV, Qiuxia Yang, Zeyu Shuang, Feng GAO, Shengping Li, Lina Zhu, Wei Wang (2023). The landscape of objective response rate of anti-PD-1/L1 monotherapy across 31 types of cancer: a system review and novel biomarker investigating. Cancer Immunology, Immunotherapy.

Min-Yi LV, Du CAI, Cheng-Hang LI, Junguo Chen, Guanman Li, Chu-Ling HU, Bao-Wen GAI, Jiaxin Lei, Ping Lan, Xiaojian Wu, Xiaosheng He, Feng GAO (2023). Senescence-based colorectal cancer subtyping reveals distinct molecular characteristics and therapeutic strategies. MedComm.

Weiqiang You, Du CAI, Minyi Lv, Peishan Hu, Feng GAO, Xiaojian Wu (2023). Immunological profiling of human colorectal cancer defines four distinct molecular subtypes. International Digestive Disease Forum.

Xin Wang, Yu-Hong Li, Baocai Xing, Lin Qi, Jie-Ying Liang, Zhong-Wu Li, Shao-Yan Xi, Yu-Ni Lai, Feng GAO, De-Shen Wang, Ming-Tao Hu, Yi Cao, Xian-Rui Zhang, Li-Jian Xu, Ronald CK Chan (2023). Deep learning-derived spatial organization features on histopathology images to predict prognosis in patients with colorectal liver metastasis, after hepatectomy.. Journal of Clinical Oncology.

Min-Yi LV, Du CAI, Cheng-Hang LI, Junguo Chen, Guanman Li, Chu-Ling HU, Bao-Wen GAI, Jia-Xin LEI, Ping Lan, Feng GAO, Xiaosheng He (2023). Senescence-Based Colorectal Cancer Subtyping Reveals Distinct Molecular Characteristics and Therapeutic Strategies. Gastroenterology.

Yuanyuan Guo, Xuantong Zhou, Feng GAO, Minjie Wang, Qi Yang, Xin Li, Zhihua Liu, Aiping Luo (2023). MiR-423-5p is a novel endogenous control for the quantification of circulating miRNAs in human esophageal squamous cell carcinoma. Heliyon.

Du CAI, Wei Wang, Min-Er ZHONG, Dejun Fan, Xuanhui Liu, Cheng-Hang LI, Ze-Ping HUANG, Qi-Qi ZHU, Min-Yi LV, Chu-Ling HU, Xin DUAN, Xiao-Jian Wu, Feng GAO (2023). An immune, stroma, and epithelial--mesenchymal transition-related signature for predicting recurrence and chemotherapy benefit in stage II--III colorectal cancer. Cancer Medicine.

Yicheng Li, Shu-Ting YANG, Minjun Liao, Zijun Zheng, Mengyao Li, Xuerong Wei, Mengqian Liu, Lei Yang (2023). Association between genetically predicted leukocyte telomere length and non-scarring alopecia: a two-sample Mendelian randomization study. Frontiers in Immunology.

Feng GAO, William C Cho, Xin Gao, Wei Wang (2023). Medical knowledge-assisted machine learning technologies in individualized medicine. Frontiers in Molecular Biosciences.

Fengao Wang, Junwei Liu, Feng GAO, Yixue Li (2023). Exploring multi-omics latent embedding spaces for characterizing tumor heterogeneity and tumoral fitness effects. bioRxiv.

Min-Er ZHONG, Xin DUAN, Ma-Yi-Di-Li Ni-Jia-Ti, Hao-Ning QI, Dong-Wei XU, Du CAI, Cheng-Hang LI, Zeping Huang, Qi-Qi ZHU, Feng GAO, Xiaojian Wu (2022). CT-based radiogenomic analysis dissects intratumor heterogeneity and predicts prognosis of colorectal cancer: a multi-institutional retrospective study. Journal of Translational Medicine.

Chu-Ling HU, Du CAI, Min-Er ZHONG, Dejun Fan, Cheng-Hang LI, Min-Yi LV, Ze-Ping HUANG, Wei Wang, Xiao-Jian Wu, Feng GAO (2022). Predicting prognosis and immunotherapy response among colorectal cancer patients based on a tumor immune microenvironment-related lncRNA signature. Frontiers in Genetics.

Feng GAO, Minhao Hu, Min-Er ZHONG, Shixiang Feng, Xuwei Tian, Xiaochun Meng, Ze-Ping HUANG, Min-Yi LV, Tao Song, Xiaofan Zhang, Xiangguang Zou, Xiaojian Wu (2022). Segmentation only uses sparse annotations: Unified weakly and semi-supervised learning in medical images. Medical Image Analysis.

Min-Er ZHONG, Ze-Ping HUANG, Xun WANG, Du CAI, Cheng-Hang LI, Feng GAO, Xiao-Jian Wu, Wei Wang (2022). A transcription factor signature can identify the CMS4 subtype and stratify the prognostic risk of colorectal cancer. Frontiers in Oncology.

Chu-Ling HU, Du CAI, Min-Er ZHONG, De-Jun FAN, Cheng-Hang LI, Min-Yi LV, Ze-Ping HUANG, Wei Wang, Xiaojian Wu, Feng GAO (2022). A tumor immune microenvironment-related lncRNA signature for the prognosis and immunotherapeutic sensitivity prediction in colorectal cancer.. Journal of Clinical Oncology.

Cheng-Hang LI, Du CAI, Min-Er ZHONG, Min-Yi LV, Ze-Ping HUANG, Qi-Qi ZHU, Chu-Ling HU, Hao-Ning QI, Xiaojian Wu, Feng GAO (2022). Multi-size deep learning based preoperative computed tomography signature for prognosis prediction of colorectal cancer. Frontiers in Genetics.

Du CAI, Hao-Ning QI, Wei Wang, Min-Er ZHONG, De-Jun FAN, Cheng-Hang LI, Xiaojian Wu, Feng GAO (2022). PIANOS: A platform independent and normalization free single-sample classifier for colorectal cancer. Gastroenterology.

Qian Cai, Yi-Ze Mao, Si-Qi Dai, Feng GAO, Qian Xiao, Wan-Ming Hu, Tao Qin, Qiu-Xia Yang, Zhao-Zhou Li, Du CAI, Min-Er ZHONG, Ke-Feng Ding, Xiaojian Wu, Rong Zhang (2022). The growth pattern of liver metastases on MRI predicts early recurrence in patients with colorectal cancer: a multicenter study. European Radiology.

Xinkai Zhao, Chaowei Fang, De-Jun FAN, Xutao Lin, Feng GAO, Guanbin Li (2022). Cross-level contrastive learning and consistency constraint for semi-supervised medical image segmentation. IEEE International Symposium on Biomedical Imaging.

Min-Yi LV, Wei Wang, Min-Er ZHONG, Du CAI, De-Jun FAN, Cheng-Hang LI, Wei-Bin KOU, Ze-Ping HUANG, Xin DUAN, Chu-Ling HU, Qi-Qi ZHU, Xiao-Sheng He, Feng GAO (2022). DNA Repair–Related Gene Signature in Predicting Prognosis of Colorectal Cancer Patients. Frontiers in Genetics.

Tongtong Kan, Shupeng Zhang, Shengtao Zhou, Ya Zhang, Yun Zhao, Yinghua Gao, Tao Zhang, Feng GAO, Xin Wang, Linjie Zhao, Mengsu Yang (2022). Single-cell RNA-seq recognized the initiator of epithelial ovarian cancer recurrence. Oncogene.

Xin DUAN, Wei Wang, Minghui Tang, Feng GAO, Xu-Dong Lin (2022). Dissecting Cellular Heterogeneity Based on Network Denoising of scRNA-seq Using Local Scaling Self-Diffusion. Frontiers in Genetics.

Ruifei Zhang, Peiwen Lai, Xiang Wan, De-Jun FAN, Feng GAO, Xiao-Jian Wu, Guanbin Li (2022). Lesion-aware dynamic kernel for polyp segmentation. Lecture Notes in Computer Science.

Xu-Tao Lin, Qiu-Ning Wu, Si Qin, De-Jun FAN, Min-Yi LV, Xi Chen, Jia-Wei Cai, Jing-Rong Weng, Yi-Feng Zou, Yu-Ming Rong, Feng GAO (2021). Identification of an autophagy-related gene signature for the prediction of prognosis in early-stage colorectal cancer. Frontiers in Genetics.

Yu-Feng Chen, Zhao-Liang Yu, Min-Yi LV, Ze-Rong Cai, Yi-Feng Zou, Ping Lan, Xiao-Jian Wu, Feng GAO (2021). Cancer-associated fibroblasts impact the clinical outcome and treatment response in colorectal cancer via immune system modulation: a comprehensive genome-wide analysis. Molecular Medicine.

Raju Kandimalla, Wei Wang, Fan Yu, Nianxin Zhou, Feng GAO, Monique Spillman, Lucie Moukova, Ondrej Slaby, Bodour Salhia, Shengtao Zhou, Xin Wang, Ajay Goel (2021). OCaMIR—a noninvasive, diagnostic signature for early-stage ovarian cancer: a multi-cohort retrospective and prospective study. Clinical Cancer Research.

Haoyang Li, Juexiao Zhou, Yi Zhou, Qiang Chen, Yangyang She, Feng GAO, Ying Xu, Jieyu Chen, Xin Gao (2021). An interpretable computer-aided diagnosis method for periodontitis from panoramic radiographs. Frontiers in Physiology.

Yu-Feng Chen, Zhao-Liang Yu, Min-Yi LV, Bin Zheng, Ying-Xin Tan, Jia Ke, Xuan-Hui Liu, Ze-Rong Cai, Yi-Feng Zou, Ping Lan, Xiao-Jian Wu, Feng GAO (2021). Genome-Wide analysis reveals hypoxic microenvironment is associated with immunosuppression in poor survival of stage II/III colorectal cancer patients. Frontiers in Medicine.

Xiaying Kuang, Du CAI, Ying Lin, Feng GAO (2021). Integrated immune-related gene signature to predict clinical outcome for patients with luminal B breast cancer.. Journal of Clinical Oncology.

Qi-Qi ZHU, Du CAI, Wei Wang, Min-Er ZHONG, De-Jun FAN, Xuanhui Liu, Cheng-Hang LI, Ze-Ping HUANG, Min-Yi LV, Chu-Ling HU, Xin DUAN, Xiaojian Wu, Feng GAO (2021). Identifying an immune-related gene-pair for prognosis prediction of metastatic colorectal cancer.. Journal of Clinical Oncology.

Yu-Feng Chen, Xiaojian Wu, Feng GAO (2021). Genome-wide analysis indicating cancer associated fibroblast (CAF) impacts on colorectal cancer (CRC) prognosis via immunosuppression.. Journal of Clinical Oncology.

Du CAI, Wei Wang, Min-Er ZHONG, De-Jun FAN, Xuanhui Liu, Cheng-Hang LI, Ze-Ping HUANG, Qi-Qi ZHU, Min-Yi LV, Chu-Ling HU, Xin DUAN, Xiaojian Wu, Feng GAO (2021). Deep learning to identify a gene signature associated with molecular subtypes that predicts prognosis in colorectal cancer.. Journal of Clinical Oncology.

Min-Er ZHONG, Du CAI, De-Jun FAN, Wei Wang, Cheng-Hang LI, Ze-Ping HUANG, Qi-Qi ZHU, Min-Yi LV, Chu-Ling HU, Xiaojian Wu, Feng GAO (2021). A model combing an immune-related genes signature and an extracellular matrix-related genes signature in predicting prognosis of left-and right-sided colon cancer. Journal of Clinical Oncology.

Xiaobin Zheng, Xuanhui Liu, Xiaoli Zhong, Ping Lan, Feng GAO, Jia Ke, Xiao-Jian Wu (2021). Su029 INTEGRATING PROGNOSIS-RELATED GENES WITH IMMUNE-RELATED GENE SIGNATURE FOR SURVIVAL STRATIFICATION OF EARLY-STAGE COLORECTAL CANCER. Gastroenterology.

Xinkai Zhao, Chaowei Fang, Feng GAO, FAN De-Jun, Xutao Lin, Guanbin Li (2021). Deep transformers for fast small intestine grounding in capsule endoscope video. IEEE International Symposium on Biomedical Imaging.

Cheng Jin, Heng Yu, Jia Ke, Peirong Ding, Yongju Yi, Xiaofeng Jiang, Xin DUAN, Jinghua Tang, Daniel T. Chang, Xiaojian Wu, Feng GAO, Ruijiang Li (2021). Predicting treatment response from longitudinal images using multi-task deep learning. Nature Communications.

Xianrui Wu, Yunfeng Zhang, Tuo Hu, Xiaowen He, Yifeng Zou, Qiling Deng, Jia Ke, Lei Lian, Xiaosheng He, Dezhi Zhao, Xuyu Cai, Zhiwei Chen, Xiaojian Wu, Jian-Bing Fan, Feng GAO, Ping Lan (2021). A novel cell-free DNA methylation-based model improves the early detection of colorectal cancer. Molecular Oncology.

Lin Qi, Jia Ke, Zhaoliang Yu, Yi Cao, Yuni Lai, Yufeng Chen, Feng GAO, Xin Wang (2021). Identification of prognostic spatial organization features in colorectal cancer microenvironment using deep learning on histopathology images. Medicine in Omics.

Xia Li, Shu-Ting YANG, Xilin Yang, Zhiguang Zhou (2021). Response to Letter to the Editor from Knobler et al:“Validation of the Swedish Diabetes Regrouping Scheme in Adult-Onset Diabetes in China”. The Journal of Clinical Endocrinology & Metabolism.

Zhao-Liang Yu, Yu-Feng Chen, Bin Zheng, Ze-Rong Cai, Yi-Feng Zou, Jia Ke, Ping Lan, Feng GAO, Xiao-Jian Wu (2021). Protein-protein interaction analysis reveals a novel cancer stem cell related target TMEM17 in colorectal cancer. Cancer Cell International.

Du CAI, Xin DUAN, Wei Wang, Ze-Ping HUANG, Qi-Qi ZHU, Min-Er ZHONG, Min-Yi LV, Cheng-Hang LI, Wei-Bin KOU, Xiao-Jian Wu, Feng GAO (2021). A metabolism-related radiomics signature for predicting the prognosis of colorectal cancer. Frontiers in Molecular Biosciences.

Zhongxu Zhu, Guiyuan Han, Hao Huang, Lingli He, Yu Chen, Jia Ke, Feng GAO, Louis Vermeulen, Xin Wang (2020). Genome-wide Discovery of MicroRNA Biomarkers for Cancer Precision Medicine. Detection Methods in Precision Medicine.

Haoyang Li, Juexiao Zhou, Yi Zhou, Jieyu Chen, Feng GAO, Ying Xu, Xin Gao (2020). Automatic and interpretable model for periodontitis diagnosis in panoramic radiographs. Medical Image Computing and Computer Assisted Intervention.

D. Cai, Y. Che, Z. Yu, C. Li, X. Duan, J. Ke, X. Wu, Feng GAO (2020). Identification of a stemness-related gene signature for predicting prognosis of patients with adjuvant chemotherapy in colorectal cancer. Annals of Oncology.

Xia Li, Shu-Ting YANG, Chuqing Cao, Xiang Yan, Lei Zheng, Lanbo Zheng, Jiarui Da, Xiaohan Tang, Linong Ji, Xilin Yang, Zhiguang Zhou (2020). Validation of the Swedish diabetes re-grouping scheme in adult-onset diabetes in China. The Journal of Clinical Endocrinology & Metabolism.

Jia Ke, Xuan-Hui Liu, Xiao-Feng Jiang, Zhen He, Jian Xiao, Bin Zheng, Yu-Feng Chen, Ze-Rong Cai, Xiao-Bin Zheng, Yi-Feng Zou, Ping Lan, Xiao-Jian Wu, Feng GAO (2020). Immune-related gene signature in predicting prognosis of early-stage colorectal cancer patients. European Journal of Surgical Oncology.

Xin DUAN, Kejun Wang, Jia Ke, Ping Lan, Feng GAO, Xiaojian Wu (2020). Multiomics-based colorectal cancer molecular subtyping using local scaling network fusion. Journal of Computational Biology.

Xin DUAN, Du CAI, Yufeng Chen, Qi-Qi ZHU, Ze-Ping HUANG, Cheng-Hang LI, Xiaojian Wu, Feng GAO (2020). Integrating diffusion components of multi-omics datasets with application to cancer molecular subtyping. Intelligent Systems for Molecular Biology.

Asif Rashid, Xin DUAN, Feng GAO, Mengsu Yang, Andrew Yen (2020). Roscovitine enhances All-trans retinoic acid (ATRA)-induced leukemia cell differentiation: Novel effects on signaling molecules for a putative Cdk2 inhibitor. Cellular Signalling.

Chuqing Cao, Shu-Ting YANG, Zhiguang Zhou (2020). GLP-1 receptor agonists and pancreatic safety concerns in type 2 diabetic patients: data from cardiovascular outcome trials. Endocrine.

Yuying Wang, Jianchao Zheng, Zhilong Li, Ruijingfang Jiang, Jiaxi Peng, Jianlong Sun, Guanghui Yang, Xin-Rong Yang, Ao Huang, Yupeng Wang, Yuan Jie, Xuanhui Liu, Feng GAO, Xiaojian Wu, Dansong Wang, Wenchuan Wu, Wenhui Lou, Jian Zhou, Jia Fan (2020). Development of a novel liquid biopsy test to diagnose and locate gastrointestinal cancers. Journal of Clinical Oncology.

Asif Rashid, Xin DUAN, Feng GAO, Mengsu Yang, Andrew Yen (2020). Roscovitine enhances all-trans retinoic acid (ATRA)-induced nuclear enrichment of an ensemble of activated signaling molecules and augments ATRA-induced myeloid cell differentiation. Oncotarget.

Shu-Ting YANG, Chuqing Cao, Zhiguo Xie, Zhiguang Zhou (2020). Analysis of potential hub genes involved in the pathogenesis of Chinese type 1 diabetic patients. Annals of Translational Medicine.

Chuqing Cao, Shu-Ting YANG, Zhiguang Zhou (2020). The potential application of Cordyceps in metabolic-related disorders. Phytotherapy Research.

Shu-Biao Ye, Yi-Kan Cheng, Jian-Cong Hu, Feng GAO, Ping Lan (2020). Development and validation of an individualized gene expression-based signature to predict overall survival in metastatic colorectal cancer. Annals of Translational Medicine.

Yangyang She, Xiangbo Kong, Yaping Ge, Ping Yin, Zhiyong Liu, Jieyu Chen, Feng GAO, Silian Fang (2020). Immune-related gene signature for predicting the prognosis of head and neck squamous cell carcinoma. Cancer Cell International.

Shu-Ting YANG, Chuqing Cao, Tuo Deng, Zhiguang Zhou (2020). Obesity-related glomerulopathy: a latent change in obesity requiring more attention. Kidney and Blood Pressure Research.

Xin DUAN, Kejun Wang, Jia Ke, Ping Lan, Feng GAO, Xiaojian Wu (2019). Multiomics-Based Colorectal Cancer Molecular Subtyping Using Local Scaling Network Fusion. Journal of Computational Biology.

Daisuke Izumi, Feng GAO, Yuetong Chen, Takatsugu Ishimoto, Kei Horino, Shu Shimada, Yasuhiro Kodera, Hideo Baba, Jinfei Chen, Xin Wang, Ajay Goel (2019). Identification, development and validation of a circulating miRNA-based diagnostic signature for early detection of gastric cancer. Annals of Oncology.

Chuqing Cao, Shu-Ting YANG, Zhiguang Zhou (2019). GLP-1 receptor agonists and risk of cancer in type 2 diabetes: an updated meta-analysis of randomized controlled trials. Endocrine.

Yi-Feng Zou, Yu-Ming Rong, Ying-Xin Tan, Jian Xiao, Zhao-Liang Yu, Yu-Feng Chen, Jia Ke, Cheng-Hang LI, Xi Chen, Xiao-Jian Wu, Ping Lan, Xu-Tao Lin, Feng GAO (2019). A signature of hypoxia-related factors reveals functional dysregulation and robustly predicts clinical outcomes in stage I/II colorectal cancer patients. Cancer Cell International.

Hui Chen, Feng GAO, Mian He, Xiao Fan Ding, Aikha M. Wong, Siu Ching Sze, Allen C. Yu, Tingting Sun, Anthony W.-H. Chan, Xin Wang, Nathalie Wong (2019). Long-Read RNA Sequencing Identifies Alternative Splice Variants in Hepatocellular Carcinoma and Tumor-Specific Isoforms. Hepatology.

Liuyan Zhang, Ping Zhu, Yao Tong, Yuzhuo Wang, Haifen Ma, Xuefei Xia, Yu Zhou, Xingguo Zhang, Feng GAO, Peng Shu (2019). An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma. OncoTargets and Therapy.

Feng GAO, Wei Wang, Miaomiao Tan, Lina Zhu, Yuchen Zhang, Evelyn Fessler, Louis Vermeulen, Xin Wang (2019). DeepCC: a novel deep learning-based framework for cancer molecular subtype classification. Oncogenesis.

Bitao Jiang, Qingsen Sun, Yao Tong, Yuzhuo Wang, Haifen Ma, Xuefei Xia, Yu Zhou, Xingguo Zhang, Feng GAO, Peng Shu (2019). An immune-related gene signature predicts prognosis of gastric cancer. Medicine.

Raju Kandimalla, Tsuyoshi Ozawa, Feng GAO, Xin Wang, Ajay Goel, T1 Colorectal Cancer Study Group (2019). Gene expression signature in surgical tissues and endoscopic biopsies identifies high-risk T1 colorectal cancers. Gastroenterology.

Yingxin Tan, Yuming Rong, Zhaoliang Yu, Feng GAO, Yufeng Chen, Xutao Lin, Yifeng Zou, Xi Chen (2019). Pathway analysis of hypoxia-related factors in early colorectal cancer patients with poor prognosis.. Journal of Clinical Oncology.

Jia Ke, Xuanhui Liu, Xiaofeng Jiang, Yufeng Chen, Zerong Cai, Ping Lan, Xiaojian Wu, Feng GAO (2019). Immune-related gene signature in predicting prognosis of early-stage colorectal cancer patients. Journal of Clinical Oncology.

Raju Kandimalla, Feng GAO, Ying Li, Hao Huang, Jia Ke, Xin Deng, Linjie Zhao, Shengtao Zhou, Ajay Goel, Xin Wang (2019). RNAMethyPro: a biologically conserved signature of N6-methyladenosine regulators for predicting survival at pan-cancer level. npj Precision Oncology.

Fuminori Sonohara, Feng GAO, Naoki Iwata, Mitsuro Kanda, Masahiko Koike, Naoki Takahashi, Yasuhide Yamada, Yasuhiro Kodera, Xin Wang, Ajay Goel (2019). Genome-wide discovery of a novel gene-expression signature for the identification of lymph node metastasis in esophageal squamous cell carcinoma. Annals of Surgery.

Wei Wang, Raju Kandimalla, Hao Huang, Lina Zhu, Ying Li, Feng GAO, Ajay Goel, Xin Wang (2019). Molecular subtyping of colorectal cancer: Recent progress, new challenges and emerging opportunities. Seminars in Cancer Biology.

Daisuke Izumi, Feng GAO, Shusuke Toden, Fuminori Sonohara, Mitsuro Kanda, Takatsugu Ishimoto, Yasuhiro Kodera, Xin Wang, Hideo Baba, Ajay Goel (2019). A genomewide transcriptomic approach identifies a novel gene expression signature for the detection of lymph node metastasis in patients with early stage gastric cancer. EBioMedicine.

Rodica P. Bunaciu, Robert J. MacDonald, Holly A. Jensen, Feng GAO, Xin Wang, Lynn Johnson, Jeffrey D. Varner, Andrew Yen (2018). Retinoic acid and 6-formylindolo(3,2-b)carbazole (FICZ) combination therapy reveals putative targets for enhancing response in non-APL AML. Leukemia and Lymphoma.

Zhen Xu, Peilin Fang, Bingzhe Xu, Yufeng Lu, Jinghui Xiong, Feng GAO, Xin Wang, Jun Fan, Peng Shi (2018). High-throughput three-dimensional chemotactic assays reveal steepness-dependent complexity in neuronal sensation to molecular gradients. Nature Communications.

Kejun Wang, Xin DUAN, Feng GAO, Wei Wang, Liangliang Liu, Xin Wang (2018). Dissecting cancer heterogeneity based on dimension reduction of transcriptomic profiles using extreme learning machines. PLoS ONE.

Raju Kandimalla, Feng GAO, Takatoshi Matsuyama, Toshiaki Ishikawa, Hiroyuki Uetake, Naoki Takahashi, Yasuhide Yamada, Carlos Becerra, Scott Kopetz, Xin Wang, Ajay Goel (2018). Genome-wide discovery and identification of a novel miRNA signature for recurrence prediction in stage II and III colorectal cancer. Clinical Cancer Research.

Jinsei Miyoshi, Feng GAO, Shusuke Toden, Martha J. Shrubsole, Marco Scarpa, Timothy Whitsett, Landon Inge, Stephen J. Meltzer, Bottiglieri Teodoro, Helen G. Coleman, Lesley A. Anderson, Xin Wang, Ajay Goel (2018). A Novel Non-Invasive Circulating Mirna Signature for Detection of Esophageal Adenocarcinoma. Gastroenterology.

Raju Kandimalla, Feng GAO, Chun Ruan, Michael Hsieh, Xin Wang, Ajay Goel (2018). Dysregulation of m6A RNA methylation regulators in colorectal cancer: Clinical implication as prognostic biomarkers and potential therapeutic targets. Cancer Research.

Tsuyoshi Ozawa, Raju Kandimalla, Feng GAO, Hiroaki Nozawa, Keisuke Hata, Hiroshi Nagata, Satoshi Okada, Daisuke Izumi, Hideo Baba, James Fleshman, Xin Wang, Toshiaki Watanabe, Ajay Goel (2018). A microRNA signature associated with metastasis of T1 colorectal cancers to lymph nodes. Gastroenterology.

Rodica P Bunaciu, Robert J MacDonald, Feng GAO, Lynn M Johnson, Jeffrey D Varner, Xin Wang, Sarah Nataraj, Monica L Guzman, Andrew Yen (2018). Potential for subsets of wt-NPM1 primary AML blasts to respond to retinoic acid treatment. Oncotarget.

Feng GAO, Xiupei Mei, Lina Zhu, Yuchen Zhang, Wei Wang, Xin Wang (2017). HTSanalyzeR2: An Ultra-Fast R/Bioconductor Package for High-Throughput Screens with Interactive Report. Intelligent Systems for Molecular Biology.

Lan Zhao, Feng GAO, Wei Wang, Xin DUAN, Yuchen Zhang, Lina Zhu, Xin Wang (2017). Poor-prognosis nasopharyngeal carcinoma as defined by a molecularly distinct subgroup and prediction by a miRNA expression signature. Journal of Clinical Oncology.

Daisuke Izumi, Shusuke Toden, Feng GAO, Jacob Turner, Mitsuro Kanda, Takatsugu Ishimoto, Yasuhiro Kodera, Xin Wang, Hideo Baba, Ajay Goel (2017). Identification, Development and Validation of a Circulating Mirna-Based Diagnostic Signature for Early Detection of Gastric Cancer. Gastroenterology.

Raju Kandimalla, Feng GAO, Naoki Takahashi, Yasuhide Yamada, Takatoshi Matsuyama, Toshiyaki Ishikawa, Xin Wang, Ajay Goel (2017). Genome-wide discovery and identification of a novel microrna signature for recurrence prediction in colorectal cancer. Cancer Research.

Raju Kandimalla, Tsuyoshi Ozawa, Feng GAO, Keisuke Hata, Hiroaki Nozawa, Hiroshi Nagata, Daisuke Izumi, Hideo Baba, James W. Fleshman, Xin Wang, Toshiaki Watanabe, Ajay Goel (2017). Genome-Wide Analysis Revealed a Robust Gene Expression Signature to Identify Lymph Node Metastasis in Submucosal Colorectal Cancer. Gastroenterology.

Jinsei Miyoshi, Shusuke Toden, Jacob Turner, Feng GAO, Raju Kandimalla, Xin Wang, Mitsuro Kanda, Hideo Baba, Yasuhiro Kodera, Ajay Goel (2017). A Novel Mirna-Based, Non-Invasive, Diagnostic Panel for Detection of Esophageal Squamous Cell Carcinoma. Gastroenterology.

Tsuyoshi Ozawa, Feng GAO, Hiroaki Nozawa, Keisuke Hata, Hiroshi Nagata, Daisuke Izumi, Hideo Baba, Xin Wang, Toshiaki Watanabe, Ajay Goel (2017). A Novel Mirna Signature for the Detection of Lymph Node Metastasis in Submucosal Colorectal Cancer Patients. Gastroenterology.

Zhongxu Zhu, Guiyuan Han, Hao Huang, Lingli He, Yu Chen, Jia Ke, Feng GAO, Louis Vermeulen, Xin Wang (2017). Biomarkers for Precision Medicine. Clinical Chemistry and Laboratory Medicine (CCLM).