Publications

PreprintJul 9, 2026medRxiv

In Vivo Spatial Transcriptomics for Bleeding-free Profiling Human Internal Organs

Conference PaperMay 1, 2026Gastroenterology

UNRAVELING THE IMPACT OF INSOMNIA ON COLORECTAL CANCER: MICROBIOME DYSBIOSIS, IMMUNOSUPPRESSIVE MICROENVIRONMENT, AND THERAPEUTIC IMPLICATIONS

Yinmeng Zhang, Du Cai, Jiahui Zhao, He Zhu, Yan Xia, Baowen Gai, Haoning Qi, Chuling Hu, Rende Huang, Mingru Mai, Nan Zhang, Xiao-Jian Wu, Hong Xu, Feng Gao

Journal ArticleMar 25, 2026Frontiers in Endocrinology

Real-world performance of open-source large language models in diabetes diagnosis

Shuting Yang^†, Sujie Liu^†, Yuxi Ma^†, Baowen Gai, Junwei Liu, Liansheng Wang^*, Feng Gao^*, Zhiguang Zhou^*

Journal ArticleMar 19, 2026CGH

INTELCAPE: A Deep Learning-Powered System for Automated, High-Accuracy Crohn's Disease Diagnosis via Capsule Endoscopy

De-Jun Fan^†, Yize Mao^†, Feng Liang^†, Zheng Liu^†, Huayu Li^†, Jian Tang, Yanan Liu, Mingjie Wang, Yuting Qian, Jie Chen, Neng Wang, Tao Yang, Shuangyi Tan, Guanbin Li^*, Feng Gao^*, Jiancong Hu^*, Xiaojian Wu^*

Code Source document DOI

Journal ArticleMar 11, 2026Cancer Letters

Multi-omics driven immune classification of colorectal cancer: Implications for immunotherapy efficacy prediction and enhancement with WNT signaling inhibition

Chuling Hu^†, Du Cai^†, Weiqiang You^†, Zhengran Zhou^†, Junwei Liu, Cheng-Hang Li, Min-Yi Lv, Bao-Wen Gai, Chong Chen, Xinxin Huang, Run Xian Wang, Xiao-Jian Wu^*, Peishan Hu^*, Feng Gao^*

PreprintMar 10, 2026medRxiv

CT4CMS: Preoperative Computed Tomography-Based Consensus Molecular Subtyping Prediction in Colorectal Cancer Using Interpretable Deep Learning

Xianrui Zhang^†, Xiuping Nie^†, Tan Wu, Du Cai, Hua Xue, Lin Qi, Yijuan Wang, Yi Cao, Lingli He, Yinghan Zhang, Yuanyao Cheng, Haotian Wang, Xiaoyu Wang, Enyu Li, Yue Dong^*, Feng Gao^*, Xin Wang^*

Journal ArticleJan 21, 2026Cell Death & Disease

Lactylation of SLC26A3 in the acidic tumor microenvironment promotes malignant progression of colorectal carcinoma

Chong Chen^†, Du Cai^†, Xuanhui Liu^†, Yifan Zheng, Xinxin Huang, Dongwen Chen, Jiawei Cai, Yiran Bie, Zhengran Zhou, Chuling Hu, Zhengyu Wei, Kuntai Cai, Ting Li, Shuzhen Luo, Dongbing Liu, Kui Wu, Zerong Cai, Feng Gao, Xiaojian Wu^*, Peishan Hu^*

Journal ArticleJan 14, 2026Diagnostics

Translating Molecular Subtypes into Cost-Effective Radiogenomic Biomarkers for Prognosis of Colorectal Cancer

Baowen Gai^†, Xin Duan, Chenghang Li, Chuling Hu, Minyi Lv, Jiaxin Lei, Runxian Wang, Feng Gao^*, Du Cai^*

Journal ArticleDec 4, 2025Cancer Science

Decoding Senescence-Driven Heterogeneity in Early-Onset Colorectal Cancer for Prognostic and Therapeutic Stratification

Du Cai^†, Mingru Mai^†, Rende Huang^†, Haoning Qi, Xingzhi Feng, Qianling Gao, Yinmeng Zhang, Chenghang Li, Xiaojian Wu^*, Yize Mao^*, Zihuan Yang^*, Feng Gao^*

Journal ArticleNov 13, 2025Cell Genomics

Predominant mutated non-canonical tumor-specific antigens identified by proteogenomics demonstrate immunogenicity and tumor suppression in CRC

Haitao Xiang^†, Xiangyu Guan^†, Yaohua Wei^†, Shuzhen Luo^†, Haibo Zhang^†, Fanyu Bu, Yixin Yan, Yunyun Fu, Yijian Li, Qumiao Xu, Penghui Lin, Dongbing Liu, Xinlan Zhou, Feng Gao, Tai Chen, Guangjun Nie, Kui Wu, Ying Gu, Longqi Liu, Ziqing Ye^*, Xiaojian Wu^*, Ruifang Zhao^*, Siqi Liu^*, Xuan Dong^*

Conference PaperSep 20, 2025MICCAI

Accurate Boundary Alignment and Realism Enhancement for Colonoscopic Polyp Image-Mask Pair Generation

Riyu Qiu, Kun Xia, Feng Gao, Shuting Yang, Du Cai, Jiacheng Wang, Yinran Chen^*, Liansheng Wang^*

Code

Conference PaperSep 20, 2025MICCAI

FSA-Net: Fractal-driven Synergistic Anatomy-aware Network for Segmenting White Line of Toldt in Laparoscopic Images

Kecheng Wu, Zhaohu Xing, Zerong Cai, Feng Gao, Wenxue Li, Lei Zhu^*

Code

Conference PaperSep 20, 2025MICCAI

Bridging Knowledge Discrepancy in Retinal Image Analysis through Federated Multi-Task Learning

Jing Yang, Yuxi Ma, Jin-Gang Yu, Feng Gao, Shuting Yang, Du Cai, Jiacheng Wang^*, Liansheng Wang^*

Code

Journal ArticleSep 19, 2025iScience

A plasma metabolite-based test to detect minimal residual disease in post-surgery patients with colorectal cancer

Zhengran Zhou^†, Richard Mortensen^†, Peishan Hu^†, Bo Jin, Xiao-bin Zheng, Xiao Li, James Schilling, C. James Chou, Karl G. Sylvester, Yanghai Cong, Xiaojian Wu, Feng Gao^*, Xuefeng B. Ling^*, Xuanhui Liu^*

Journal ArticleSep 14, 2025NAR

PCsRNAdb: a comprehensive resource of small noncoding RNAs across cancers

Ren-de Huang^†, Jiang Li^†, Qi Cao^†, Lixia Wang^†, Zhixiong Shao, Haochun Yang, Xinlei Zhang, Chuanlai Yang, Xiangya Kong, Qiuyue Gu, Jianmin Wu, Tsan-Yu Chiu, Penghu Lian^*, Kui Wu^*, Feng Gao^*, Zhongxu Zhu^*

Code Project DOI

Journal ArticleSep 10, 2025IJS

Immunological Microenvironment Differences Between Left and Right Colon Cancer: Dynamic Interactions of CASC15+KLK6+ Epithelial Subpopulation with T Cells and Mast Cells

Yibin Zhao^†, Hao Liu^†, Yu Wang, Jie Shen, Yang Le, Peiyuan Li, Yuxiang Zhao^*, Feng Gao^*, Wei Cui^*

Journal ArticleSep 3, 2025Clin Transl Disc

The role of tertiary lymphoid structures in renal cell carcinoma: From predictive biomarker to therapeutic target

Chong-xiang Gao^†, Du Cai, Jianguang Qiu^*, Feng Gao^*

Journal ArticleSep 1, 2025Translational Cancer Research

Integrating prognosis-related genes with immune-related gene signature for development and validation of a survival stratification model for early-stage colorectal cancer

Zhengran Zhou, Xiaobin Zheng, Zerong Cai, Yufeng Chen, Weiqiang You, Zhaoliang Yu, Xi Chen, Yifeng Zou, Xiaojian Wu, Feng Gao, Xuanhui Liu

Journal ArticleJul 23, 2025Advanced Science

CRCFound: A Colorectal Cancer CT Image Foundation Model Based on Self-Supervised Learning

Jing Yang^†, Du Cai^†, Junwei Liu^†, Zhenfeng Zhuang^†, Yibin Zhao, Feng-ao Wang, Cheng-hang Li, Chuling Hu, Baowen Gai, Yiping Chen, Yixue Li, Liansheng Wang^*, Feng Gao^*, Xiaojian Wu^*

Journal ArticleJul 18, 2025TMI

SegMamba-V2: Long-range Sequential Modeling Mamba For General 3D Medical Image Segmentation

Zhaohu Xing^†, Tian Ye, Yijun Yang, Du Cai, Baowen Gai, Xiao-Jian Wu^*, Feng Gao^*, Lei Zhu^*

Code DOI

Journal ArticleJul 16, 2025Nature Communications

Personalized risk stratification in colorectal cancer via PIANOS system

Du Cai^†, Haoning Qi^†, Qiuxia Yang^†, Huayu Li^†, Cheng-hang Li, Chuling Hu, Baowen Gai, Xu Zhang, Yize Mao^*, Feng Gao^*, Xiaojian Wu^*

Journal ArticleJul 1, 2025BMC Cancer

Certain pMMR colorectal cancer patients should undergo additional MSI-PCR testing to reduce the risk of misdiagnosing MSI-H and Lynch syndrome

Jinglin Huang^†, Liang Xu^†, Yacheng Cai, Xiaoli Tan, Hanjie Lin, Zhiting Chen, Chao Wang, Weihao Deng, Xinhui Fu^*

Journal ArticleJun 9, 2025ESMO Gastrointest Oncol

Poor-prognosis young-onset colorectal cancer is defined by the mesenchymal subtype and can be predicted by integrating molecular and histopathological characteristics

Jia Ke^†, Ying Li^†, Lin Qi^†, Xiang Li, Wei Wang, Sanne Ten Hoorn, Yin Zhu, Hao Huang, Feng Gao, Louis Vermeulen, Xin Wang^*

Journal ArticleMar 7, 2025Advanced Science

Interpretable Multimodal Fusion Model for Bridged Histology and Genomics Survival Prediction in Pan-Cancer

Feng Gao^†, Junxiang Ding^†, Baowen Gai^†, Du Cai^†, Chuling Hu, Feng-Ao Wang, Ruikun He, Junwei Liu^*, Yixue Li^*, Xiao-Jian Wu^*

Journal ArticleMar 1, 2025TVC

HADiff: hierarchy aggregated diffusion model for pathology image segmentation

Xuefeng Zhang, Bin Yan, Zhaohu Xing, Feng Gao, Yuandong Tao, Zhenyan Han, Weiming Wang^*, Lei Zhu^*

Code DOI

Journal ArticleFeb 27, 2025Genomics Proteomics Bioinformatics

Challenges in AI-driven Biomedical Multimodal Data Fusion and Analysis

Junwei Liu^†, Xiaoping Cen^†, Chenxin Yi, Feng-Ao Wang, Junxiang Ding, Jinyu Cheng, Qinhua Wu, Baowen Gai, Yiwen Zhou, Ruikun He, Feng Gao^*, Yixue Li^*

Journal ArticleDec 30, 2024Scientific Reports

Anatomic association between the gastrocolic trunk of Henle and right colic artery by high-quality CT venography

Xinzhe Zhao^†, Hongda Zhang, Hengyu Zhao, Decan Kong, Weijie Zeng, Feng Gao, Xiaochun Meng, Jia Ke^*

Journal ArticleDec 27, 2024Gland Surgery

Integrated immune-related gene signature predicts clinical outcome for patients with Luminal B breast cancer

Zhen Xie^†, Du Cai^†, Runyi Ye, Zhen Shan, Ying Lin, Feng Gao^*, Nan Shao^*, Xiaying Kuang^*

Journal ArticleNov 19, 2024Nature Communications

Single-cell encoded gene silencing for high-throughput combinatorial siRNA screening

Feng Guo^†, Xianglin Ji^†, Chuxiao Xiong, Hailiang Sun, Zhenghua Liang, Richard Yan-Do, Baowen Gai, Feng Gao, Linfeng Huang, Zhongping Li, Becki Yi Kuang, Peng Shi^*

Journal ArticleSep 19, 2024Journal of Clinical Pathology

Head-to-head comparative study: evaluating three panels for MSI-PCR testing in patients with colorectal and gastric cancer

Xinhui Fu^†, Jinglin Huang^†, Xinjuan Fan, Chao Wang, Weihao Deng, Xiaoli Tan, Zhiting Chen, Yacheng Cai, Hanjie Lin, Liang Xu, Jiaxin Zou, Huanmiao Zhan, Shuhui Huang, Yan Huang^*

Source document

Journal ArticleSep 1, 2024International Journal of Surgery

Deciphering Tertiary Lymphoid Structure Heterogeneity Reveals Prognostic Signature and Therapeutic Potentials for Colorectal Cancer: A Multicenter Retrospective Cohort Study

Jia-Xin Lei^†, Runxian Wang^†, Chuling Hu, Xiaoying Lou, Min-Yi Lv, Cheng-hang Li, Baowen Gai, Xiao-Jian Wu^*, Ruoxu Dou^*, Du Cai^*, Feng Gao^*

Journal ArticleAug 25, 2024Journal of Practical Medicine / Shiyong Yixue Zazhi

A new vision of diabetes classification： A shift from clinical manifestation to etiological molecular mechanism

Shuting Yang^†, Shuoming Luo, Zhiguang Zhou^*

Journal ArticleJun 6, 2024Genome Biology

TMO-Net: an explainable pretrained multi-omics model for multi-task learning in oncology

Feng-Ao Wang^†, Zhenfeng Zhuang^†, Feng Gao^†, Ruikun He, Shaoting Zhang, Liansheng Wang^*, Junwei Liu^*, Yixue Li^*

Journal ArticleApr 12, 2024IEEE Transactions on Medical Imaging

Structure Embedded Nucleus Classification for Histopathology Images

Wei Lou^†, Xiang Wan, Guanbin Li, Xiaoying Lou, Cheng-Hang Li, Feng Gao, Haofeng Li^*

Conference PaperApr 12, 2024IEEE International Symposium on Biomedical Imaging

Cross-Level Contrastive Learning and Consistency Constraint for Semi-Supervised Medical Image Segmentation

Xinkai Zhao, Chaowei Fang, De-Jun Fan, Xutao Lin, Feng Gao, Guanbin Li

Journal ArticleApr 5, 2024International Journal of Cancer

Prognosis and immunotherapy efficacy in dMMR&MSS colorectal cancer patients and an MSI status predicting model

Xinhui Fu^†, Jinglin Huang^†, Junling Zhu, Xinjuan Fan, Chao Wang, Weihao Deng, Xiaoli Tan, Zhiting Chen, Yacheng Cai, Hanjie Lin, Guannan Wang, Ning Zhang, Yongmin Zhu, Ji Chen, Huanmiao Zhan, Shuhui Huang, Yongzhen Fang, Yuhua Li^*, Yan Huang^*

Source document

Journal ArticleFeb 27, 2024Frontiers in Medicine

Editorial: Clinical risk assessment and intervention of gastrointestinal tumors driven by big-data

Nan Zhang^*, Wei Wang, Xin Gao, Feng Gao

Journal ArticleDec 20, 2023Neuron

Genome-wide study reveals novel roles for formin-2 in axon regeneration as a microtubule dynamics regulator and therapeutic target for nerve repair

Ngan Pan Bennett Au^†, Tan Wu, Xinyu Chen, Feng Gao, Yuen Tung Yolanda Li, Wing Yip Tam, Kwan Ngok Yu, Daniel H Geschwind, Giovanni Coppola, Xin Wang, Chi Him Eddie Ma

Journal ArticleDec 1, 2023Diseases of the Colon & Rectum

A Longitudinal MRI-Based Artificial Intelligence System to Predict Pathological Complete Response After Neoadjuvant Therapy in Rectal Cancer: A Multicenter Validation Study

Jia Ke^†, Cheng Jin^†, Jinghua Tang^†, Haimei Cao^†, Songbing He^†, Peirong Ding, Xiaofeng Jiang, Hengyu Zhao, Wuteng Cao, Xiaochun Meng, Feng Gao, Ping Lan, Ruijiang Li^*, Xiaojian Wu^*

Journal ArticleNov 8, 2023Scientific Reports

A prognostic model for ovarian neoplasms established by an integrated analysis of 1580 transcriptomic profiles

Yanjiao Hua^†, Du Cai, Cole Andrea Shirley, Sien Mo, Ruyun Chen, Feng Gao, Fangying Chen^*

Journal ArticleOct 1, 2023iScience

Deep learning-derived spatial organization features on histology images predicts prognosis in colorectal liver metastasis patients after hepatectomy

Lin Qi^†, Jie-ying Liang^†, Zhong-wu Li, Shao-yan Xi, Yu-ni Lai, Feng Gao, Xian-rui Zhang, De-shen Wang, Ming-tao Hu, Yi Cao, Li-Jian Xu, Ronald C K Chan, Bao-Cai Xing, Xin Wang^*, Yu-Hong Li^*

Conference PaperOct 1, 2023Medical Image Computing and Computer Assisted Intervention

Multi-scope Analysis Driven Hierarchical Graph Transformer for Whole Slide Image Based Cancer Survival Prediction

Wentai Hou, Yan He, Bingjian Yao, Lequan Yu, Rongshan Yu, Feng Gao, Liansheng Wang

Journal ArticleSep 1, 2023Zhonghua Nei Ke Za Zhi (Chinese Journal of Internal Medicine)

Application of the Chinese Expert Consensus on Diabetes Classification in Clinical Practice

Shuting Yang^†, Chao Deng, Bobo He, Xi Chen, Xia Li, Zhiguang Zhou^*

Journal ArticleJul 1, 2023Cancer Immunology, Immunotherapy

The landscape of objective response rate of anti-PD-1/L1 monotherapy across 31 types of cancer: a system review and novel biomarker investigating

Yize Mao^†, Hui Xie^†, Min-yi Lv^†, Qiuxia Yang, Zeyu Shuang, Feng Gao, Shengping Li^*, Lina Zhu^*, Wei Wang^*

Journal ArticleJun 26, 2023MedComm

Senescence-based colorectal cancer subtyping reveals distinct molecular characteristics and therapeutic strategies

Min-Yi Lv^†, Du Cai^†, Cheng-Hang Li^†, Junguo Chen^†, Guanman Li, Chuling Hu, Baowen Gai, Jiaxin Lei, Ping Lan^*, Xiaojian Wu^*, Xiaosheng He^*, Feng Gao^*

Conference PaperJun 1, 2023International Digestive Disease Forum

Immunological profiling of human colorectal cancer defines four distinct molecular subtypes

Weiqiang You, Du Cai, Minyi Lv, Peishan Hu, Feng Gao, Xiaojian Wu

Conference PaperJun 1, 2023Journal of Clinical Oncology

Deep learning-derived spatial organization features on histopathology images to predict prognosis in patients with colorectal liver metastasis, after hepatectomy.

Xin Wang, Yu-hong Li, Baocai Xing, Lin Qi, Jie-Ying Liang, Zhong-Wu Li, Shao-Yan Xi, Yu-Ni Lai, Feng Gao, De-Shen Wang, Ming-Tao Hu, Yi Cao, Xian-Rui Zhang, Li-Jian Xu, Ronald CK Chan

Conference PaperMay 1, 2023Gastroenterology

Senescence-Based Colorectal Cancer Subtyping Reveals Distinct Molecular Characteristics and Therapeutic Strategies

Min-Yi Lv, Du Cai, Cheng-Hang Li, Junguo Chen, Guanman Li, Chuling Hu, Baowen Gai, Jia-xin Lei, Ping Lan, Feng Gao, Xiaosheng He

Journal ArticleApr 1, 2023Cancer Medicine

An immune, stroma, and epithelial--mesenchymal transition-related signature for predicting recurrence and chemotherapy benefit in stage II--III colorectal cancer

Du Cai^†, Wei Wang, Min-Er Zhong, Dejun Fan, Xuanhui Liu, Cheng-Hang Li, Ze-Ping Huang, Qiqi Zhu, Min-Yi Lv, Chuling Hu, Xin Duan, Xiao-Jian Wu^*, Feng Gao^*

Journal ArticleApr 1, 2023Heliyon

MiR-423-5p is a novel endogenous control for the quantification of circulating miRNAs in human esophageal squamous cell carcinoma

Yuanyuan Guo^†, Xuantong Zhou, Feng Gao, Minjie Wang, Qi Yang, Xin Li, Zhihua Liu, Aiping Luo^*

Journal ArticleMar 24, 2023Frontiers in Molecular Biosciences

Editorial: Medical knowledge-assisted machine learning technologies in individualized medicine

Feng Gao, William C. Cho, Xin Gao, Wei Wang

Journal ArticleJan 30, 2023Frontiers in Immunology

Association between genetically predicted leukocyte telomere length and non-scarring alopecia: a two-sample Mendelian randomization study

Yicheng Li^†, Shuting Yang, Minjun Liao, Zijun Zheng, Mengyao Li, Xuerong Wei, Mengqian Liu, Lei Yang^*

Journal ArticleJan 1, 2023Frontiers in Molecular Biosciences

Medical knowledge-assisted machine learning technologies in individualized medicine

Feng Gao^†, William C Cho, Xin Gao, Wei Wang^*

PreprintJan 1, 2023bioRxiv

Exploring multi-omics latent embedding spaces for characterizing tumor heterogeneity and tumoral fitness effects

Fengao Wang^†, Junwei Liu, Feng Gao, Yixue Li^*

Journal ArticleDec 8, 2022Journal of Translational Medicine

CT-based radiogenomic analysis dissects intratumor heterogeneity and predicts prognosis of colorectal cancer: a multi-institutional retrospective study

Min-Er Zhong^†, Xin Duan^†, Ma-yi-di-li Ni-jia-ti, Haoning Qi, Dongwei Xu, Du Cai, Cheng-Hang Li, Zeping Huang, Qiqi Zhu, Feng Gao^*, Xiaojian Wu^*

Journal ArticleSep 7, 2022Frontiers in Genetics

Predicting prognosis and immunotherapy response among colorectal cancer patients based on a tumor immune microenvironment-related lncRNA signature

Chuling Hu^†, Du Cai, Min-Er Zhong, Dejun Fan, Cheng-Hang Li, Min-Yi Lv, Ze-Ping Huang, Wei Wang, Xiao-Jian Wu, Feng Gao^*

Journal ArticleAug 1, 2022Medical Image Analysis

Segmentation only uses sparse annotations: Unified weakly and semi-supervised learning in medical images

Feng Gao^†*, Minhao Hu^†, Min-Er Zhong^†, Shixiang Feng, Xuwei Tian, Xiaochun Meng, Ze-ping Huang, Min-yi Lv, Tao Song, Xiaofan Zhang^*, Xiangguang Zou^*, Xiaojian Wu^*

Journal ArticleJun 30, 2022Frontiers in Oncology

A transcription factor signature can identify the CMS4 subtype and stratify the prognostic risk of colorectal cancer

Min-Er Zhong^†, Ze-Ping Huang^†, Xun Wang^†, Du Cai, Cheng-Hang Li, Feng Gao^*, Xiao-Jian Wu^*, Wei Wang^*

Conference PaperJun 1, 2022Journal of Clinical Oncology

A tumor immune microenvironment-related lncRNA signature for the prognosis and immunotherapeutic sensitivity prediction in colorectal cancer.

Chuling Hu, Du Cai, Min-Er Zhong, De-jun Fan, Cheng-Hang Li, Min-Yi Lv, Ze-Ping Huang, Wei Wang, Xiaojian Wu, Feng Gao

Journal ArticleMay 12, 2022Frontiers in Genetics

Multi-size deep learning based preoperative computed tomography signature for prognosis prediction of colorectal cancer

Cheng-Hang Li^†, Du Cai, Min-Er Zhong, Min-Yi Lv, Ze-Ping Huang, Qiqi Zhu, Chuling Hu, Haoning Qi, Xiaojian Wu, Feng Gao^*

Conference PaperMay 1, 2022Gastroenterology

PIANOS: A platform independent and normalization free single-sample classifier for colorectal cancer

Du Cai, Haoning Qi, Wei Wang, Min-Er Zhong, De-jun Fan, Cheng-Hang Li, Xiaojian Wu, Feng Gao

Journal ArticleApr 14, 2022European Radiology

The growth pattern of liver metastases on MRI predicts early recurrence in patients with colorectal cancer: a multicenter study

Qian Cai^†, Yi-ze Mao^†, Si-qi Dai^†, Feng Gao^†, Qian Xiao, Wan-ming Hu, Tao Qin, Qiu-xia Yang, Zhao-zhou Li, Du Cai, Min-Er Zhong, Ke-feng Ding^*, Xiaojian Wu^*, Rong Zhang^*

Conference PaperMar 28, 2022IEEE International Symposium on Biomedical Imaging

Cross-level contrastive learning and consistency constraint for semi-supervised medical image segmentation

Xinkai Zhao, Chaowei Fang, De-Jun Fan, Xutao Lin, Feng Gao, Guanbin Li

Journal ArticleMar 11, 2022Frontiers in Genetics

DNA Repair–Related Gene Signature in Predicting Prognosis of Colorectal Cancer Patients

Min-yi Lv^†, Wei Wang^†, Min-Er Zhong^†, Du Cai, De-jun Fan, Cheng-hang Li, Wei-Bin Kou, Ze-ping Huang, Xin Duan, Chuling Hu, Qiqi Zhu, Xiao-sheng He, Feng Gao^*

Journal ArticleFeb 11, 2022Molecular Cancer

A microRNA-based liquid biopsy signature for the early detection of esophageal squamous cell carcinoma: a retrospective, prospective and multicenter study

Jinsei Miyoshi^†, Zhongxu Zhu^†, Aiping Luo^†, Shusuke Toden^†, Xuantong Zhou, Daisuke Izumi, Mitsuro Kanda, Tetsuji Takayama, Iqbal M. Parker, Minjie Wang, Feng Gao, Ali H. Zaidi, Hideo Baba, Yasuhiro Kodera, Yongping Cui, Xin Wang^*, Zhihua Liu^*, Ajay Goel^*

Journal ArticleFeb 4, 2022Oncogene

Single-cell RNA-seq recognized the initiator of epithelial ovarian cancer recurrence

Tongtong Kan^†, Shupeng Zhang, Shengtao Zhou, Ya Zhang, Yun Zhao, Yinghua Gao, Tao Zhang, Feng Gao, Xin Wang, Linjie Zhao, Mengsu Yang^*

Journal ArticleJan 11, 2022Frontiers in Genetics

Dissecting Cellular Heterogeneity Based on Network Denoising of scRNA-seq Using Local Scaling Self-Diffusion

Xin Duan^†, Wei Wang, Minghui Tang, Feng Gao^*, Xu-dong Lin^*

Conference PaperJan 1, 2022Lecture Notes in Computer Science

Lesion-aware dynamic kernel for polyp segmentation

Ruifei Zhang, Peiwen Lai, Xiang Wan, De-Jun Fan, Feng Gao, Xiao-Jian Wu, Guanbin Li

Journal ArticleNov 25, 2021Frontiers in Genetics

Identification of an autophagy-related gene signature for the prediction of prognosis in early-stage colorectal cancer

Xu-tao Lin^†, Qiu-ning Wu, Si Qin, De-jun Fan, Min-yi Lv, Xi Chen, Jia-wei Cai, Jing-rong Weng, Yi-feng Zou, Yu-ming Rong^*, Feng Gao^*

Journal ArticleOct 30, 2021Molecular Medicine

Cancer-associated fibroblasts impact the clinical outcome and treatment response in colorectal cancer via immune system modulation: a comprehensive genome-wide analysis

Yu-feng Chen^†, Zhao-liang Yu^†, Min-yi Lv^†, Ze-rong Cai, Yi-feng Zou, Ping Lan^*, Xiao-jian Wu^*, Feng Gao^*

Journal ArticleAug 1, 2021Clinical Cancer Research

OCaMIR—a noninvasive, diagnostic signature for early-stage ovarian cancer: a multi-cohort retrospective and prospective study

Raju Kandimalla^†, Wei Wang, Fan Yu, Nianxin Zhou, Feng Gao, Monique Spillman, Lucie Moukova, Ondrej Slaby, Bodour Salhia, Shengtao Zhou^*, Xin Wang^*, Ajay Goel^*

Journal ArticleJun 22, 2021Frontiers in Physiology

An interpretable computer-aided diagnosis method for periodontitis from panoramic radiographs

Haoyang Li^†, Juexiao Zhou, Yi Zhou, Qiang Chen, Yangyang She, Feng Gao, Ying Xu, Jieyu Chen, Xin Gao^*