SegMamba-V2: Long-range Sequential Modeling Mamba For General 3D Medical Image Segmentation

Jan 1, 2025·
Zhaohu Xing
1st Author
,
Tian Ye
,
Yijun Yang
Du CAI
Du CAI
Bao-Wen GAI
Bao-Wen GAI
,
Xiao-Jian Wu
Co-Corresponding Author
Feng GAO
Feng GAO
Co-Corresponding Author
,
Lei Zhu
Corresponding Author
· 0 min read
Abstract
The Transformer architecture has demonstrated remarkable results in 3D medical image segmentation due to its capability of modeling global relationships. However, it poses a significant computational burden when processing high-dimensional medical images. Mamba, as a State Space Model (SSM), has recently emerged as a notable approach for modeling long-range dependencies in sequential data. Although a substantial amount of Mamba-based research has focused on natural language and 2D image processing, few studies explore the capability of Mamba on 3D medical images. In this paper, we propose SegMamba-V2, a novel 3D medical image segmentation model, to effectively capture long-range dependencies within whole-volume features at each scale. To achieve this goal, we first devise a hierarchical scale downsampling strategy to enhance the receptive field and mitigate information loss during downsampling. Furthermore, we design a novel tri-orientated spatial Mamba block that extends the global dependency modeling process from one plane to three orthogonal planes to improve feature representation capability. Moreover, we collect and annotate a large-scale dataset (named CRC-2000) with fine-grained categories to facilitate benchmarking evaluation in 3D colorectal cancer (CRC) segmentation. We evaluate the effectiveness of our SegMamba-V2 on CRC-2000 and three other large-scale 3D medical image segmentation datasets, covering various modalities, organs, and segmentation targets. Experimental results demonstrate that our SegMamba-V2 outperforms state-of-the-art methods by a significant margin, which indicates the universality and effectiveness of the proposed model on 3D medical image segmentation tasks.
Type
Publication
IEEE Transactions on Medical Imaging
publication
Du CAI
Authors
Postdoc
I focus on leveraging explainable AI and large foundation models to advance medical imaging and digital pathology in colorectal cancer research.
Bao-Wen GAI
Authors
PhD Student
I am a PhD student working on AI methods for colorectal cancer diagnosis and prognosis.
Feng GAO
Authors
Professor
My research leverages AI and big data to improve diagnostics, prognostics, and ultimately, outcomes in cancer and other biomedical fields.