Publications
Deciphering Tertiary Lymphoid Structure Heterogeneity Reveals Prognostic Signature and Therapeutic Potentials for Colorectal Cancer: A Multicenter Retrospective Cohort StudyJia-Xin Lei#, Runxian Wang#, Chuling Hu, Xiaoying Lou, Min-Yi Lv, Chenghang Li, Baowen Gai, Xiao-Jian Wu*, Ruoxu Dou*, Du Cai*, Feng Gao*
PMID
DOI
International Journal of Surgery 2024
Genome-wide study reveals novel roles for formin-2 in axon regeneration as a microtubule dynamics regulator and therapeutic target for nerve repairNgan Pan Bennett Au, Tan Wu, Xinyu Chen, Feng Gao, Yuen Tung Yolanda Li, Wing Yip Tam, Kwan Ngok Yu, Daniel H Geschwind, Giovanni Coppola, Xin Wang, Chi Him Eddie Ma
Deep learning-derived spatial organization features on histology images predicts prognosis in colorectal liver metastasis patients after hepatectomyLin Qi,
Jie-ying Liang,
Zhong-wu Li,
Shao-yan Xi,
Yu-ni Lai,
Feng Gao,
Xian-rui Zhang,
De-shen Wang,
Ming-tao Hu,
Yi Cao,
others Senescence-based colorectal cancer subtyping reveals distinct molecular characteristics and therapeutic strategiesMin‐Yi Lv#, Du Cai#, Cheng‐Hang Li#, Junguo Chen#, Guanman Li, Chuling Hu, Baowen Gai, Jiaxin Lei, Ping Lan*, Xiaojian Wu*, Xiaosheng He*, Feng Gao*
Deep learning-derived spatial organization features on histopathology images to predict prognosis in patients with colorectal liver metastasis, after hepatectomy.Xin Wang,
Yu-hong Li,
Baocai Xing,
Lin Qi,
Jie-Ying Liang,
Zhong-Wu Li,
Shao-Yan Xi,
Yu-Ni Lai,
Feng Gao,
De-Shen Wang,
others DOI
Journal of Clinical Oncology 2023
Senescence-Based Colorectal Cancer Subtyping Reveals Distinct Molecular Characteristics and Therapeutic StrategiesMin-Yi Lv,
Du Cai,
Cheng-Hang Li,
Junguo Chen,
Guanman Li,
Chuling Hu,
Baowen Gai,
Jiaxin Lei,
Ping Lan,
Feng Gao,
others DOI
Gastroenterology 2023
CT-based radiogenomic analysis dissects intratumor heterogeneity and predicts prognosis of colorectal cancer: a multi-institutional retrospective studyMin-Er Zhong#, Xin Duan#, Ma-yi-di-li Ni-jia-ti, Haoning Qi, Dongwei Xu, Du Cai, Chenghang Li, Zeping Huang, Qiqi Zhu, Feng Gao*, Xiaojian Wu*
DOI
Journal of Translational Medicine 2022
Segmentation only uses sparse annotations: Unified weakly and semi-supervised learning in medical imagesFeng Gao#*, Minhao Hu#, Min-Er Zhong#, Shixiang Feng, Xuwei Tian, Xiaochun Meng, Zeping Huang, Minyi Lv, Tao Song, Xiaofan Zhang*, Xiangguang Zou*, Xiaojian Wu*
DOI
Medical Image Analysis 2022
The growth pattern of liver metastases on MRI predicts early recurrence in patients with colorectal cancer: a multicenter studyQian Cai#, Yi-ze Mao#, Si-qi Dai#, Feng Gao#, Qian Xiao, Wan-ming Hu, Tao Qin, Qiu-xia Yang, Zhao-zhou Li, Du Cai, Min-Er Zhong, Ke-feng Ding*, Xiaojian Wu*, Rong Zhang*
DOI
European Radiology 2022
DNA Repair–Related Gene Signature in Predicting Prognosis of Colorectal Cancer PatientsMin-yi Lv#, Wei Wang#, Min-Er Zhong#, Cai Du, De-jun Fan, Cheng-hang Li, Wei-Bin Kou, Ze-ping Huang, Xin Duan, Chu-ling Hu, Qi-qi Zhu, Xiao-sheng He*, Feng Gao*
DOI
Frontiers in Genetics 2022
A microRNA-based liquid biopsy signature for the early detection of esophageal squamous cell carcinoma: a retrospective, prospective and multicenter studyJinsei Miyoshi*, Zhongxu Zhu*, Aiping Luo*, Shusuke Toden*, Xuantong Zhou, Daisuke Izumi, Mitsuro Kanda, Tetsuji Takayama, Iqbal M. Parker, Minjie Wang, Feng Gao, Ali H. Zaidi, Hideo Baba, Yasuhiro Kodera, Yongping Cui, Xin Wang#, Zhihua Liu#, Ajay Goel#
Single-cell RNA-seq recognized the initiator of epithelial ovarian cancer recurrenceTongtong Kan,
Shupeng Zhang,
Shengtao Zhou,
Ya Zhang,
Yun Zhao,
Yinghua Gao,
Tao Zhang,
Feng Gao,
Xin Wang,
Linjie Zhao,
others OCaMIR—a noninvasive, diagnostic signature for early-stage ovarian cancer: a multi-cohort retrospective and prospective studyRaju Kandimalla,
Wei Wang,
Fan Yu,
Nianxin Zhou,
Feng Gao,
Monique Spillman,
Lucie Moukova,
Ondrej Slaby,
Bodour Salhia,
Shengtao Zhou,
others DOI
Clinical cancer research 2021
A model combing an immune-related genes signature and an extracellular matrix-related genes signature in predicting prognosis of left-and right-sided colon cancerMin-Er Zhong, Du Cai, Dejun Fan, Wei Wang, Cheng-Hang Li, Ze-Ping Huang, Qiqi Zhu, Min-Yi Lv, Chuling Hu, Xiaojian Wu, Feng Gao
DOI
Journal of Clinical Oncology 2021
Predicting treatment response from longitudinal images using multi-task deep learningCheng Jin#, Heng Yu#, Jia Ke#, Peirong Ding#, Yongju Yi, Xiaofeng Jiang, Xin Duan, Jinghua Tang, Daniel T. Chang, Xiaojian Wu*, Feng Gao*, Ruijiang Li*
PMID
DOI
Nature Communications 2021
A novel cell-free DNA methylation-based model improves the early detection of colorectal cancerXianrui Wu#, Yunfeng Zhang#, Tuo Hu, Xiaowen He, Yifeng Zou, Qiling Deng, Jia Ke, Lei Lian, Xiaosheng He, Dezhi Zhao, Xuyu Cai, Zhiwei Chen, Xiaojian Wu, Jian‐Bing Fan*, Feng Gao*, Ping Lan*
Immune-related gene signature in predicting prognosis of early-stage colorectal cancer patientsJia Ke#, Xuan-hui Liu#, Xiao-feng Jiang, Zhen He, Jian Xiao, Bin Zheng, Yu-feng Chen, Ze-rong Cai, Xiao-bin Zheng, Yi-feng Zou, Ping Lan*, Xiao-jian Wu*, Feng Gao*
DOI
European Journal of Surgical Oncology 2020
Hippo-YAP signaling controls lineage differentiation of mouse embryonic stem cells through modulating the formation of super-enhancersXiang Sun, Zhijun Ren, Yixian Cun, Cai Zhao, Xianglin Huang, Jiajian Zhou, Rong Hu, Xiaoxi Su, Lu Ji, Peng Li, King Lun Kingston Mak, Feng Gao, Yi Yang, He Xu, Junjun Ding, Nan Cao, Shuo Li, Wensheng Zhang, Ping Lan, Hao Sun, Jinkai Wang, Ping Yuan
PMID
DOI
Nucleic Acids Research 2020
Development of a novel liquid biopsy test to diagnose and locate gastrointestinal cancersYuying Wang, Jianchao Zheng, Zhilong Li, Ruijingfang Jiang, Jiaxi Peng, Jianlong Sun, Guanghui Yang, Xin-Rong Yang, Ao Huang, Yupeng Wang, Yuan Jie, Xuanhui Liu, Feng Gao, Xiaojian Wu, Dansong Wang, Wenchuan Wu, Wenhui Lou, Jian Zhou, Jia Fan
Link
DOI
Journal of Clinical Oncology 2020
A signature of hypoxia-related factors reveals functional dysregulation and robustly predicts clinical outcomes in stage I/II colorectal cancer patientsYi-Feng Zou, Yu-Ming Rong, Ying-Xin Tan, Jian Xiao, Zhao-Liang Yu, Yu-Feng Chen, Jia Ke, Cheng-Hang Li, Xi Chen, Xiao-Jian Wu, Ping Lan, Xu-Tao Lin*, Feng Gao*
PMID
DOI
Cancer Cell International 2019
Long-Read RNA Sequencing Identifies Alternative Splice Variants in Hepatocellular Carcinoma and Tumor-Specific IsoformsHui Chen#, Feng Gao#, Mian He#, Xiao Fan Ding, Aikha M. Wong, Siu Ching Sze, Allen C. Yu, Tingting Sun, Anthony W.-H. Chan, Xin Wang*, Nathalie Wong*
Gene expression signature in surgical tissues and endoscopic biopsies identifies high-risk T1 colorectal cancersRaju Kandimalla,
Tsuyoshi Ozawa,
Feng Gao,
Xin Wang,
Ajay Goel,
Hiroaki Nozawa,
Keisuke Hata,
Hiroshi Nagata,
Satoshi Okada,
Toshiaki Watanabe,
others DOI
Gastroenterology 2019
Genome-wide discovery and identification of a novel miRNA signature for recurrence prediction in stage II and III colorectal cancerRaju Kandimalla,
Feng Gao,
Takatoshi Matsuyama,
Toshiaki Ishikawa,
Hiroyuki Uetake,
Naoki Takahashi,
Yasuhide Yamada,
Carlos Becerra,
Scott Kopetz,
Xin Wang,
others DOI
Clinical Cancer Research 2018
A Novel Non-Invasive Circulating Mirna Signature for Detection of Esophageal AdenocarcinomaJinsei Miyoshi,
Feng Gao,
Shusuke Toden,
Martha J Shrubsole,
Marco Scarpa,
Timothy Whitsett,
Landon Inge,
Stephen J Meltzer,
Bottiglieri Teodoro,
Helen G Coleman,
others DOI
Gastroenterology 2018
A microRNA signature associated with metastasis of T1 colorectal cancers to lymph nodesTsuyoshi Ozawa,
Raju Kandimalla,
Feng Gao,
Hiroaki Nozawa,
Keisuke Hata,
Hiroshi Nagata,
Satoshi Okada,
Daisuke Izumi,
Hideo Baba,
James Fleshman,
others DOI
Gastroenterology 2018
Genome-Wide Analysis Revealed a Robust Gene Expression Signature to Identify Lymph Node Metastasis in Submucosal Colorectal CancerRaju Kandimalla,
Tsuyoshi Ozawa,
Feng Gao,
Keisuke Hata,
Hiroaki Nozawa,
Hiroshi Nagata,
Daisuke Izumi,
Hideo Baba,
James W Fleshman,
Xin Wang,
others DOI
Gastroenterology 2017
Identification, Development and Validation of a Circulating Mirna-Based Diagnostic Signature for Early Detection of Gastric CancerDaisuke Izumi, Shusuke Toden, Feng Gao, Jacob Turner, Mitsuro Kanda, Takatsugu Ishimoto, Yasuhiro Kodera, Xin Wang, Hideo Baba, Ajay Goel
Link
Gastroenterology 2017
A Novel Mirna-Based, Non-Invasive, Diagnostic Panel for Detection of Esophageal Squamous Cell CarcinomaJinsei Miyoshi, Shusuke Toden, Jacob Turner, Feng Gao, Raju Kandimalla, Xin Wang, Mitsuro Kanda, Hideo Baba, Yasuhiro Kodera, Ajay Goel
Link
Gastroenterology 2017